Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCA1O95477 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 AC009102.3-201ENST00000623118 1491 ntBASIC14.69□□□□□ -0.06
ABCA1O95477 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ABCA1O95477 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
ABCA1O95477 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.69□□□□□ -0.06
ABCA1O95477 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCA1O95477 AL078644.1-201ENST00000609881 752 ntBASIC14.69□□□□□ -0.06
ABCA1O95477 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
ABCA1O95477 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ABCA1O95477 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ABCA1O95477 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 MYLKP1-201ENST00000509077 1580 ntBASIC14.69□□□□□ -0.06
ABCA1O95477 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ABCA1O95477 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCA1O95477 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.68□□□□□ -0.06
ABCA1O95477 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
ABCA1O95477 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ABCA1O95477 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ABCA1O95477 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ABCA1O95477 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ABCA1O95477 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.68□□□□□ -0.06
ABCA1O95477 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.68□□□□□ -0.06
ABCA1O95477 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.68□□□□□ -0.06
ABCA1O95477 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ABCA1O95477 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCA1O95477 KLF4P1-201ENST00000412782 1185 ntBASIC14.67□□□□□ -0.06
ABCA1O95477 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCA1O95477 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 AC005829.1-201ENST00000570002 483 ntBASIC14.67□□□□□ -0.06
ABCA1O95477 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.67□□□□□ -0.06
ABCA1O95477 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.67□□□□□ -0.06
ABCA1O95477 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 AL138781.2-201ENST00000617896 1843 ntBASIC14.67□□□□□ -0.06
ABCA1O95477 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ABCA1O95477 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ABCA1O95477 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ABCA1O95477 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ABCA1O95477 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms