Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.99■■□□□ 1.27
LTN1O94822 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.99■■□□□ 1.27
LTN1O94822 AC026120.1-201ENST00000611536 926 ntBASIC22.99■■□□□ 1.27
LTN1O94822 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LTN1O94822 AP001059.3-201ENST00000619053 235 ntBASIC22.99■■□□□ 1.27
LTN1O94822 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
LTN1O94822 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LTN1O94822 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 AC093214.1-201ENST00000511688 1107 ntBASIC22.98■■□□□ 1.27
LTN1O94822 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.98■■□□□ 1.27
LTN1O94822 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 AL121761.2-201ENST00000598007 1648 ntBASIC22.98■■□□□ 1.27
LTN1O94822 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.98■■□□□ 1.27
LTN1O94822 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LTN1O94822 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC22.98■■□□□ 1.27
LTN1O94822 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LTN1O94822 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
LTN1O94822 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.97■■□□□ 1.27
LTN1O94822 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
LTN1O94822 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.97■■□□□ 1.27
LTN1O94822 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LTN1O94822 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LTN1O94822 FAM86GP-201ENST00000448322 971 ntBASIC22.96■■□□□ 1.27
LTN1O94822 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.96■■□□□ 1.27
LTN1O94822 AC004449.1-201ENST00000564240 433 ntBASIC22.96■■□□□ 1.27
LTN1O94822 RARRES2P8-201ENST00000566335 367 ntBASIC22.96■■□□□ 1.27
LTN1O94822 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.96■■□□□ 1.27
LTN1O94822 AL390955.2-201ENST00000603032 514 ntBASIC22.96■■□□□ 1.27
LTN1O94822 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
LTN1O94822 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LTN1O94822 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.96■■□□□ 1.27
LTN1O94822 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LTN1O94822 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.96■■□□□ 1.27
LTN1O94822 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
LTN1O94822 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC22.96■■□□□ 1.27
LTN1O94822 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
LTN1O94822 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.96■■□□□ 1.27
LTN1O94822 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.96■■□□□ 1.27
LTN1O94822 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22.96■■□□□ 1.27
LTN1O94822 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
LTN1O94822 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.96■■□□□ 1.27
LTN1O94822 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LTN1O94822 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LTN1O94822 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
LTN1O94822 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LTN1O94822 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
LTN1O94822 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.96■■□□□ 1.27
LTN1O94822 AL009183.1-201ENST00000603760 355 ntBASIC22.96■■□□□ 1.27
LTN1O94822 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.96■■□□□ 1.27
LTN1O94822 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
LTN1O94822 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.95■■□□□ 1.27
LTN1O94822 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
LTN1O94822 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.95■■□□□ 1.27
LTN1O94822 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.95■■□□□ 1.26
LTN1O94822 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
LTN1O94822 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LTN1O94822 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.95■■□□□ 1.26
LTN1O94822 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LTN1O94822 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LTN1O94822 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LTN1O94822 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.95■■□□□ 1.26
LTN1O94822 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.95■■□□□ 1.26
LTN1O94822 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.95■■□□□ 1.26
LTN1O94822 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LTN1O94822 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
LTN1O94822 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LTN1O94822 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
LTN1O94822 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.95■■□□□ 1.26
LTN1O94822 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LTN1O94822 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC22.94■■□□□ 1.26
LTN1O94822 CD81-202ENST00000381036 880 ntTSL 3 BASIC22.94■■□□□ 1.26
LTN1O94822 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 TFAMP1-201ENST00000412727 736 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms