Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.93■□□□□ 0.3
SEC22BO75396 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC22BO75396 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.92■□□□□ 0.3
SEC22BO75396 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.92■□□□□ 0.3
SEC22BO75396 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.92■□□□□ 0.3
SEC22BO75396 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.92■□□□□ 0.3
SEC22BO75396 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 AC124067.4-201ENST00000519691 2379 ntBASIC16.92■□□□□ 0.3
SEC22BO75396 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC22BO75396 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SEC22BO75396 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 AC211429.1-201ENST00000415277 523 ntBASIC16.92■□□□□ 0.3
SEC22BO75396 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.92■□□□□ 0.3
SEC22BO75396 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 VENTXP5-201ENST00000523979 775 ntBASIC16.92■□□□□ 0.3
SEC22BO75396 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC22BO75396 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC22BO75396 AC006011.2-201ENST00000621313 1158 ntBASIC16.92■□□□□ 0.3
SEC22BO75396 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SEC22BO75396 AC016396.2-201ENST00000562575 1417 ntBASIC16.92■□□□□ 0.3
SEC22BO75396 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SEC22BO75396 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.92■□□□□ 0.3
SEC22BO75396 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
SEC22BO75396 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC22BO75396 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.92■□□□□ 0.3
SEC22BO75396 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SEC22BO75396 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SEC22BO75396 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.91■□□□□ 0.3
SEC22BO75396 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.91■□□□□ 0.3
SEC22BO75396 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.91■□□□□ 0.3
SEC22BO75396 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.91■□□□□ 0.3
SEC22BO75396 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.91■□□□□ 0.3
SEC22BO75396 AL390719.2-201ENST00000606993 987 ntBASIC16.91■□□□□ 0.3
SEC22BO75396 HYMAI.1-201ENST00000620949 238 ntBASIC16.91■□□□□ 0.3
SEC22BO75396 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.91■□□□□ 0.3
SEC22BO75396 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.91■□□□□ 0.3
SEC22BO75396 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SEC22BO75396 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.91■□□□□ 0.3
SEC22BO75396 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 Z83836.1-201ENST00000624605 1642 ntBASIC16.91■□□□□ 0.3
SEC22BO75396 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SEC22BO75396 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.91■□□□□ 0.3
SEC22BO75396 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SEC22BO75396 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC22BO75396 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
SEC22BO75396 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.9■□□□□ 0.3
SEC22BO75396 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SEC22BO75396 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SEC22BO75396 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SEC22BO75396 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22BO75396 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SEC22BO75396 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.9■□□□□ 0.3
SEC22BO75396 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SEC22BO75396 AL121761.2-201ENST00000598007 1648 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms