Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM3O75382 AC112698.1-201ENST00000510299 916 ntBASIC16.38■□□□□ 0.21
TRIM3O75382 FOSL1P1-201ENST00000511041 816 ntBASIC16.38■□□□□ 0.21
TRIM3O75382 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM3O75382 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 AC005336.2-201ENST00000593183 939 ntBASIC16.38■□□□□ 0.21
TRIM3O75382 AC099336.1-202ENST00000602961 463 ntBASIC16.38■□□□□ 0.21
TRIM3O75382 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 AC011270.2-201ENST00000624293 2550 ntBASIC16.38■□□□□ 0.21
TRIM3O75382 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRIM3O75382 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM3O75382 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM3O75382 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 DUTP2-201ENST00000519164 463 ntBASIC16.37■□□□□ 0.21
TRIM3O75382 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM3O75382 AL121772.3-201ENST00000610840 674 ntBASIC16.37■□□□□ 0.21
TRIM3O75382 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM3O75382 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM3O75382 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM3O75382 AL096828.2-201ENST00000567259 1965 ntBASIC16.37■□□□□ 0.21
TRIM3O75382 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM3O75382 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM3O75382 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM3O75382 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM3O75382 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRIM3O75382 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM3O75382 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM3O75382 MINOS1P3-201ENST00000457048 203 ntBASIC16.36■□□□□ 0.21
TRIM3O75382 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM3O75382 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM3O75382 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms