Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.8■□□□□ 0.12
PTP4A3O75365 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.8■□□□□ 0.12
PTP4A3O75365 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PTP4A3O75365 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.8■□□□□ 0.12
PTP4A3O75365 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A3O75365 LINC02012-201ENST00000608206 1725 ntBASIC15.8■□□□□ 0.12
PTP4A3O75365 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.8■□□□□ 0.12
PTP4A3O75365 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A3O75365 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PTP4A3O75365 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.8■□□□□ 0.12
PTP4A3O75365 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PTP4A3O75365 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTP4A3O75365 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.8■□□□□ 0.12
PTP4A3O75365 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A3O75365 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 AC007967.3-201ENST00000434308 558 ntBASIC15.8■□□□□ 0.12
PTP4A3O75365 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.8■□□□□ 0.12
PTP4A3O75365 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.8■□□□□ 0.12
PTP4A3O75365 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.8■□□□□ 0.12
PTP4A3O75365 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.8■□□□□ 0.12
PTP4A3O75365 AC083849.1-201ENST00000615227 514 ntBASIC15.8■□□□□ 0.12
PTP4A3O75365 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.8■□□□□ 0.12
PTP4A3O75365 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 AGGF1P2-201ENST00000426656 2106 ntBASIC15.8■□□□□ 0.12
PTP4A3O75365 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A3O75365 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTP4A3O75365 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A3O75365 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.79■□□□□ 0.12
PTP4A3O75365 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PTP4A3O75365 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTP4A3O75365 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTP4A3O75365 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 MYCLP1-201ENST00000372451 1075 ntBASIC15.79■□□□□ 0.12
PTP4A3O75365 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.79■□□□□ 0.12
PTP4A3O75365 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.79■□□□□ 0.12
PTP4A3O75365 AC063952.2-201ENST00000498792 1227 ntBASIC15.79■□□□□ 0.12
PTP4A3O75365 GUSBP12-201ENST00000513727 720 ntBASIC15.79■□□□□ 0.12
PTP4A3O75365 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.79■□□□□ 0.12
PTP4A3O75365 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.79■□□□□ 0.12
PTP4A3O75365 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 AC093525.9-201ENST00000624961 1746 ntBASIC15.79■□□□□ 0.12
PTP4A3O75365 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PTP4A3O75365 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A3O75365 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTP4A3O75365 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 AC125634.1-201ENST00000438758 1403 ntBASIC15.78■□□□□ 0.12
PTP4A3O75365 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
PTP4A3O75365 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.78■□□□□ 0.12
PTP4A3O75365 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTP4A3O75365 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
PTP4A3O75365 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PTP4A3O75365 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PTP4A3O75365 AC092647.4-201ENST00000457211 535 ntBASIC15.78■□□□□ 0.12
PTP4A3O75365 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.78■□□□□ 0.12
PTP4A3O75365 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.78■□□□□ 0.12
PTP4A3O75365 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTP4A3O75365 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 AC018695.7-201ENST00000624587 2492 ntBASIC15.78■□□□□ 0.12
PTP4A3O75365 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.78■□□□□ 0.12
PTP4A3O75365 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTP4A3O75365 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A3O75365 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTP4A3O75365 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms