Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB2O43679 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LDB2O43679 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB2O43679 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.52■□□□□ 0.39
LDB2O43679 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB2O43679 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LDB2O43679 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB2O43679 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB2O43679 AP001094.4-201ENST00000579008 2176 ntBASIC17.52■□□□□ 0.39
LDB2O43679 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.52■□□□□ 0.39
LDB2O43679 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LDB2O43679 AC116353.5-201ENST00000638148 1699 ntBASIC17.52■□□□□ 0.39
LDB2O43679 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 AC046185.3-201ENST00000623228 1824 ntBASIC17.51■□□□□ 0.39
LDB2O43679 AC090340.1-201ENST00000620778 4980 ntBASIC17.51■□□□□ 0.39
LDB2O43679 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LDB2O43679 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LDB2O43679 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LDB2O43679 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.51■□□□□ 0.39
LDB2O43679 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
LDB2O43679 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.51■□□□□ 0.39
LDB2O43679 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 PMPCAP1-201ENST00000508114 1576 ntBASIC17.51■□□□□ 0.39
LDB2O43679 MIR5100-201ENST00000579544 119 ntBASIC17.51■□□□□ 0.39
LDB2O43679 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.51■□□□□ 0.39
LDB2O43679 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LDB2O43679 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LDB2O43679 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.51■□□□□ 0.39
LDB2O43679 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LDB2O43679 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB2O43679 BCL2-203ENST00000589955 5011 ntBASIC17.5■□□□□ 0.39
LDB2O43679 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB2O43679 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LDB2O43679 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB2O43679 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.5■□□□□ 0.39
LDB2O43679 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 NUS1P2-201ENST00000417358 873 ntBASIC17.5■□□□□ 0.39
LDB2O43679 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LDB2O43679 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB2O43679 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB2O43679 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB2O43679 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 AC009336.1-201ENST00000608941 1553 ntBASIC17.49■□□□□ 0.39
LDB2O43679 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB2O43679 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 AC106820.2-201ENST00000563775 3264 ntBASIC17.49■□□□□ 0.39
LDB2O43679 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LDB2O43679 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LDB2O43679 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB2O43679 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.49■□□□□ 0.39
LDB2O43679 SLC25A1P3-201ENST00000395415 828 ntBASIC17.49■□□□□ 0.39
LDB2O43679 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB2O43679 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB2O43679 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.49■□□□□ 0.39
LDB2O43679 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.49■□□□□ 0.39
LDB2O43679 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB2O43679 AC138894.3-201ENST00000603787 634 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms