Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 IGHV3-41-201ENST00000613121 348 ntBASIC15.55■□□□□ 0.08
SGCEO43556 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 OR6D1P-203ENST00000641209 4860 ntBASIC15.55■□□□□ 0.08
SGCEO43556 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SGCEO43556 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGCEO43556 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SGCEO43556 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SGCEO43556 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SGCEO43556 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SGCEO43556 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
SGCEO43556 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SGCEO43556 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.54■□□□□ 0.08
SGCEO43556 BX276092.7-203ENST00000637198 1536 ntBASIC15.54■□□□□ 0.08
SGCEO43556 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SGCEO43556 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
SGCEO43556 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SGCEO43556 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SGCEO43556 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SGCEO43556 BX276092.5-203ENST00000456199 560 ntBASIC15.54■□□□□ 0.08
SGCEO43556 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.54■□□□□ 0.08
SGCEO43556 FAM86EP-206ENST00000510506 987 ntBASIC15.54■□□□□ 0.08
SGCEO43556 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.54■□□□□ 0.08
SGCEO43556 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.54■□□□□ 0.08
SGCEO43556 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.54■□□□□ 0.08
SGCEO43556 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.54■□□□□ 0.08
SGCEO43556 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.54■□□□□ 0.08
SGCEO43556 AL592071.1-201ENST00000611956 408 ntBASIC15.54■□□□□ 0.08
SGCEO43556 AC124864.1-201ENST00000623408 392 ntBASIC15.54■□□□□ 0.08
SGCEO43556 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SGCEO43556 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SGCEO43556 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SGCEO43556 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SGCEO43556 AC133963.1-201ENST00000504166 1679 ntBASIC15.54■□□□□ 0.08
SGCEO43556 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SGCEO43556 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.53■□□□□ 0.08
SGCEO43556 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.53■□□□□ 0.08
SGCEO43556 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.53■□□□□ 0.08
SGCEO43556 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.53■□□□□ 0.08
SGCEO43556 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.53■□□□□ 0.08
SGCEO43556 AL121672.3-201ENST00000608644 468 ntBASIC15.53■□□□□ 0.08
SGCEO43556 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.53■□□□□ 0.08
SGCEO43556 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.53■□□□□ 0.08
SGCEO43556 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SGCEO43556 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SGCEO43556 LINC00304-203ENST00000565008 1864 ntBASIC15.52■□□□□ 0.08
SGCEO43556 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SGCEO43556 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.52■□□□□ 0.08
SGCEO43556 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.52■□□□□ 0.08
SGCEO43556 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SGCEO43556 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SGCEO43556 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.52■□□□□ 0.08
SGCEO43556 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SGCEO43556 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.52■□□□□ 0.08
SGCEO43556 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SGCEO43556 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms