Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC105339.3-201ENST00000560043 636 ntBASIC17.69■□□□□ 0.42
SMAD6O43541 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.69■□□□□ 0.42
SMAD6O43541 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SMAD6O43541 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.69■□□□□ 0.42
SMAD6O43541 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.69■□□□□ 0.42
SMAD6O43541 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 AL589182.2-201ENST00000619332 1049 ntBASIC17.69■□□□□ 0.42
SMAD6O43541 LYSMD4-203ENST00000378904 2122 ntBASIC17.69■□□□□ 0.42
SMAD6O43541 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.69■□□□□ 0.42
SMAD6O43541 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMAD6O43541 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SMAD6O43541 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.68■□□□□ 0.42
SMAD6O43541 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD6O43541 AC133963.1-201ENST00000504166 1679 ntBASIC17.68■□□□□ 0.42
SMAD6O43541 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 AC046185.3-201ENST00000623228 1824 ntBASIC17.68■□□□□ 0.42
SMAD6O43541 AC097637.2-201ENST00000624096 1997 ntBASIC17.68■□□□□ 0.42
SMAD6O43541 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD6O43541 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.68■□□□□ 0.42
SMAD6O43541 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD6O43541 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 AC098831.1-202ENST00000438821 336 ntBASIC17.68■□□□□ 0.42
SMAD6O43541 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.68■□□□□ 0.42
SMAD6O43541 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD6O43541 IGHV3-22-201ENST00000520721 359 ntBASIC17.68■□□□□ 0.42
SMAD6O43541 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.68■□□□□ 0.42
SMAD6O43541 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.68■□□□□ 0.42
SMAD6O43541 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.68■□□□□ 0.42
SMAD6O43541 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
SMAD6O43541 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 AF228730.7-201ENST00000641842 219 ntBASIC17.68■□□□□ 0.42
SMAD6O43541 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.68■□□□□ 0.42
SMAD6O43541 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD6O43541 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD6O43541 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD6O43541 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD6O43541 AC073621.1-201ENST00000392730 636 ntBASIC17.67■□□□□ 0.42
SMAD6O43541 KRT18P27-201ENST00000427733 1299 ntBASIC17.67■□□□□ 0.42
SMAD6O43541 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.67■□□□□ 0.42
SMAD6O43541 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.67■□□□□ 0.42
SMAD6O43541 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD6O43541 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.67■□□□□ 0.42
SMAD6O43541 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.67■□□□□ 0.42
SMAD6O43541 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD6O43541 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMAD6O43541 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMAD6O43541 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SMAD6O43541 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD6O43541 RPL13AP23-201ENST00000480739 586 ntBASIC17.66■□□□□ 0.42
SMAD6O43541 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.66■□□□□ 0.42
SMAD6O43541 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.66■□□□□ 0.42
SMAD6O43541 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD6O43541 AC004706.3-202ENST00000621574 984 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms