Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PHGDHO43175 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHGDHO43175 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHGDHO43175 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHGDHO43175 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PHGDHO43175 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHGDHO43175 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PHGDHO43175 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.47■□□□□ 0.39
PHGDHO43175 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHGDHO43175 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
PHGDHO43175 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.46■□□□□ 0.39
PHGDHO43175 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.46■□□□□ 0.39
PHGDHO43175 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.46■□□□□ 0.39
PHGDHO43175 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.46■□□□□ 0.39
PHGDHO43175 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.46■□□□□ 0.39
PHGDHO43175 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.46■□□□□ 0.39
PHGDHO43175 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.46■□□□□ 0.39
PHGDHO43175 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHGDHO43175 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.46■□□□□ 0.39
PHGDHO43175 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.46■□□□□ 0.38
PHGDHO43175 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PHGDHO43175 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 AC010460.3-201ENST00000511359 1579 ntBASIC17.45■□□□□ 0.38
PHGDHO43175 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
PHGDHO43175 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.45■□□□□ 0.38
PHGDHO43175 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.45■□□□□ 0.38
PHGDHO43175 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.45■□□□□ 0.38
PHGDHO43175 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 AC104076.2-201ENST00000448912 469 ntBASIC17.45■□□□□ 0.38
PHGDHO43175 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.45■□□□□ 0.38
PHGDHO43175 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.45■□□□□ 0.38
PHGDHO43175 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.45■□□□□ 0.38
PHGDHO43175 AC083849.1-201ENST00000615227 514 ntBASIC17.45■□□□□ 0.38
PHGDHO43175 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 AL121761.2-201ENST00000598007 1648 ntBASIC17.45■□□□□ 0.38
PHGDHO43175 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PHGDHO43175 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PHGDHO43175 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHGDHO43175 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PHGDHO43175 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
PHGDHO43175 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PHGDHO43175 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHGDHO43175 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHGDHO43175 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.45■□□□□ 0.38
PHGDHO43175 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PHGDHO43175 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PHGDHO43175 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.44■□□□□ 0.38
PHGDHO43175 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.44■□□□□ 0.38
PHGDHO43175 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHGDHO43175 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.44■□□□□ 0.38
PHGDHO43175 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.44■□□□□ 0.38
PHGDHO43175 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 AC096633.1-201ENST00000422446 749 ntBASIC17.44■□□□□ 0.38
PHGDHO43175 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PHGDHO43175 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.44■□□□□ 0.38
PHGDHO43175 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.44■□□□□ 0.38
PHGDHO43175 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.44■□□□□ 0.38
PHGDHO43175 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PHGDHO43175 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.44■□□□□ 0.38
PHGDHO43175 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHGDHO43175 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHGDHO43175 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms