Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.74■□□□□ 0.27
RTCAO00442 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RTCAO00442 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RTCAO00442 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RTCAO00442 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.74■□□□□ 0.27
RTCAO00442 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RTCAO00442 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 RCN1P2-201ENST00000398357 915 ntBASIC16.74■□□□□ 0.27
RTCAO00442 HCG4P8-203ENST00000443049 980 ntBASIC16.74■□□□□ 0.27
RTCAO00442 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.74■□□□□ 0.27
RTCAO00442 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 AC012615.1-201ENST00000565797 1299 ntBASIC16.74■□□□□ 0.27
RTCAO00442 AC011467.2-201ENST00000598425 242 ntBASIC16.74■□□□□ 0.27
RTCAO00442 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RTCAO00442 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RTCAO00442 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.74■□□□□ 0.27
RTCAO00442 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.74■□□□□ 0.27
RTCAO00442 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.74■□□□□ 0.27
RTCAO00442 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTCAO00442 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.73■□□□□ 0.27
RTCAO00442 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.73■□□□□ 0.27
RTCAO00442 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.73■□□□□ 0.27
RTCAO00442 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTCAO00442 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.73■□□□□ 0.27
RTCAO00442 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RTCAO00442 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RTCAO00442 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTCAO00442 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.73■□□□□ 0.27
RTCAO00442 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.73■□□□□ 0.27
RTCAO00442 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.73■□□□□ 0.27
RTCAO00442 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.73■□□□□ 0.27
RTCAO00442 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.73■□□□□ 0.27
RTCAO00442 AC138894.3-201ENST00000603787 634 ntBASIC16.73■□□□□ 0.27
RTCAO00442 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
RTCAO00442 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RTCAO00442 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.73■□□□□ 0.27
RTCAO00442 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTCAO00442 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.72■□□□□ 0.27
RTCAO00442 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTCAO00442 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTCAO00442 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.72■□□□□ 0.27
RTCAO00442 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RTCAO00442 NUS1P2-201ENST00000417358 873 ntBASIC16.72■□□□□ 0.27
RTCAO00442 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RTCAO00442 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.72■□□□□ 0.27
RTCAO00442 AC002558.1-201ENST00000488906 803 ntBASIC16.72■□□□□ 0.27
RTCAO00442 AC122714.2-201ENST00000502787 707 ntBASIC16.72■□□□□ 0.27
RTCAO00442 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.72■□□□□ 0.27
RTCAO00442 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RTCAO00442 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RTCAO00442 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 AL049757.1-201ENST00000616842 1596 ntBASIC16.72■□□□□ 0.27
RTCAO00442 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTCAO00442 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms