Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC009947.1-201ENST00000444350 727 ntBASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC108751.1-201ENST00000490852 363 ntBASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC135050.7-201ENST00000624508 2218 ntBASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AC006504.4-201ENST00000592118 1568 ntBASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SLC25A6P5-201ENST00000435663 894 ntBASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 RNA5SP416-201ENST00000516838 111 ntBASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C1QTNF3-AMACRE9PGA6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PKD1P1-201ENST00000458669 6805 ntBASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 REXO1L11P-201ENST00000620964 1927 ntBASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 LINC00982-205ENST00000420957 435 ntBASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 KRT18P3-201ENST00000451602 1288 ntBASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms