Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 AC090953.1-201ENST00000604305 1092 ntBASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 NPAP1P7-201ENST00000613027 823 ntBASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 AC008147.4-201ENST00000617570 1204 ntBASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 AL162741.1-201ENST00000565563 1558 ntBASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPDYE4A6NLX3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SPDYE4A6NLX3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 MIR3180-5-201ENST00000583743 153 ntBASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 AC090950.1-202ENST00000605733 644 ntBASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPDYE4A6NLX3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 IRX1P1-201ENST00000438849 1838 ntBASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 AL023284.2-201ENST00000405850 579 ntBASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 AC055748.1-201ENST00000489836 959 ntBASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 RN7SL510P-201ENST00000581311 263 ntBASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SPDYE4A6NLX3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms