Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.69■□□□□ 0.1
TVP23AA6NH52 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TVP23AA6NH52 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 AC084018.2-201ENST00000613093 2607 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MIR662-201ENST00000384847 95 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 TSPY5P-201ENST00000426936 936 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MTCL1P1-201ENST00000446207 792 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 AC112907.2-201ENST00000448639 330 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 VENTXP5-201ENST00000523979 775 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 LYSMD4-203ENST00000378904 2122 ntBASIC15.68■□□□□ 0.1
TVP23AA6NH52 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TVP23AA6NH52 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.68■□□□□ 0.1
TVP23AA6NH52 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 NKILA-202ENST00000614771 2598 ntBASIC15.67■□□□□ 0.1
TVP23AA6NH52 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 HBZP1-201ENST00000354915 429 ntBASIC15.67■□□□□ 0.1
TVP23AA6NH52 RNF152P1-201ENST00000397754 604 ntBASIC15.67■□□□□ 0.1
TVP23AA6NH52 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 AC068472.1-201ENST00000474589 881 ntBASIC15.67■□□□□ 0.1
TVP23AA6NH52 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 GPR32P1-201ENST00000601788 811 ntBASIC15.67■□□□□ 0.1
TVP23AA6NH52 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 AC011676.5-201ENST00000624864 2660 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms