Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 KRT18P16-201ENST00000510337 1294 ntBASIC16.3■□□□□ 0.2
CCDC160A6NGH7 AP001330.3-201ENST00000520123 633 ntBASIC16.3■□□□□ 0.2
CCDC160A6NGH7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 AC092437.1-201ENST00000624794 1048 ntBASIC16.3■□□□□ 0.2
CCDC160A6NGH7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 ST20-AS1-201ENST00000560255 4223 ntBASIC16.3■□□□□ 0.2
CCDC160A6NGH7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 HLA-J-201ENST00000462773 1622 ntBASIC16.3■□□□□ 0.2
CCDC160A6NGH7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC160A6NGH7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 HTR7P1-201ENST00000538670 1336 ntBASIC16.29■□□□□ 0.2
CCDC160A6NGH7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 AL136116.3-201ENST00000402907 1138 ntBASIC16.29■□□□□ 0.2
CCDC160A6NGH7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 LINC00304-203ENST00000565008 1864 ntBASIC16.29■□□□□ 0.2
CCDC160A6NGH7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC160A6NGH7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 LINC02228-203ENST00000641970 1355 ntBASIC16.28■□□□□ 0.2
CCDC160A6NGH7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC160A6NGH7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms