Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMNCA6NCL1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMNCA6NCL1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMNCA6NCL1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GMNCA6NCL1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.57■□□□□ 0.4
GMNCA6NCL1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GMNCA6NCL1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GMNCA6NCL1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 AL365203.3-201ENST00000609742 2057 ntBASIC17.56■□□□□ 0.4
GMNCA6NCL1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 KRT16P5-201ENST00000455284 522 ntBASIC17.56■□□□□ 0.4
GMNCA6NCL1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 AL109923.1-201ENST00000618799 583 ntBASIC17.56■□□□□ 0.4
GMNCA6NCL1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
GMNCA6NCL1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GMNCA6NCL1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 NIFKP9-201ENST00000419265 221 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 FAM207BP-201ENST00000447172 505 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 AC133041.1-202ENST00000642053 222 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
GMNCA6NCL1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 KRT8P7-201ENST00000533003 1432 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 KRT8P9-201ENST00000558927 1449 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 LINC01311-201ENST00000565162 1445 ntBASIC17.55■□□□□ 0.4
GMNCA6NCL1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GMNCA6NCL1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.54■□□□□ 0.4
GMNCA6NCL1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 AC130371.2-201ENST00000619443 611 ntBASIC17.54■□□□□ 0.4
GMNCA6NCL1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GMNCA6NCL1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GMNCA6NCL1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms