Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AL355312.1-201ENST00000407115 2176 ntBASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AC087163.2-201ENST00000457299 853 ntBASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 AL078644.1-201ENST00000609881 752 ntBASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 DNAJB3-202ENST00000449667 1266 ntBASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 C20orf181-201ENST00000623918 480 ntBASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 AC004877.2-201ENST00000623941 599 ntBASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.02■■□□□ 1.6
CCDC144AA2RUR9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.6
CCDC144AA2RUR9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC25.01■■□□□ 1.6
CCDC144AA2RUR9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CCDC144AA2RUR9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCDC144AA2RUR9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC144AA2RUR9 BCAR1-209ENST00000546196 1340 ntBASIC25■■□□□ 1.59
CCDC144AA2RUR9 AC133963.1-201ENST00000504166 1679 ntBASIC25■■□□□ 1.59
CCDC144AA2RUR9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCDC144AA2RUR9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
CCDC144AA2RUR9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCDC144AA2RUR9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCDC144AA2RUR9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC144AA2RUR9 AC211486.1-202ENST00000416371 468 ntBASIC25■■□□□ 1.59
CCDC144AA2RUR9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC25■■□□□ 1.59
CCDC144AA2RUR9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25■■□□□ 1.59
CCDC144AA2RUR9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25■■□□□ 1.59
CCDC144AA2RUR9 SLC25A6P2-201ENST00000497974 877 ntBASIC25■■□□□ 1.59
CCDC144AA2RUR9 AC211476.1-201ENST00000503899 468 ntBASIC25■■□□□ 1.59
CCDC144AA2RUR9 AC005829.1-201ENST00000570002 483 ntBASIC25■■□□□ 1.59
CCDC144AA2RUR9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC25■■□□□ 1.59
CCDC144AA2RUR9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC144AA2RUR9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 MKNK2P1-201ENST00000437526 628 ntBASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 CXCL1P1-201ENST00000502804 216 ntBASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
CCDC144AA2RUR9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms