Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 AL773604.1-201ENST00000617417 272 ntBASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 KRT8P50-201ENST00000562022 1438 ntBASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 AC099343.3-201ENST00000605834 2503 ntBASIC17.43■□□□□ 0.38
PCDHGA7Q9Y5G6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 RNA5SP419-201ENST00000515908 135 ntBASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 AC011676.5-201ENST00000624864 2660 ntBASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA7Q9Y5G6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 TP73-AS1-207ENST00000624167 988 ntBASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA7Q9Y5G6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 HTR7P1-202ENST00000624664 4411 ntBASIC17.4■□□□□ 0.38
PCDHGA7Q9Y5G6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms