Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 AC096582.2-201ENST00000510860 516 ntBASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 POLD2P1-201ENST00000511220 997 ntBASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 REXO1L11P-201ENST00000620964 1927 ntBASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHB1Q9Y5F3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 AC243591.1-201ENST00000452967 1364 ntBASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 AL138688.1-201ENST00000624851 1594 ntBASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 POM121L3P-201ENST00000419331 1163 ntBASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 AF186996.4-201ENST00000467186 377 ntBASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 KRT18P58-201ENST00000527480 1120 ntBASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 MIR5100-201ENST00000579544 119 ntBASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB1Q9Y5F3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 AC005104.2-201ENST00000427818 678 ntBASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB1Q9Y5F3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB1Q9Y5F3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB1Q9Y5F3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHB1Q9Y5F3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB1Q9Y5F3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB1Q9Y5F3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB1Q9Y5F3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms