Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 AL441883.1-201ENST00000566170 1045 ntBASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 AL139327.4-201ENST00000612362 153 ntBASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 AGGF1P2-201ENST00000426656 2106 ntBASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF6Q9Y4K3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 AC046158.3-201ENST00000624947 2558 ntBASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 IGHGP-201ENST00000390555 1178 ntBASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 MTCL1P1-201ENST00000446207 792 ntBASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 AC145285.6-201ENST00000604632 637 ntBASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF6Q9Y4K3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 SPDYE15P-201ENST00000424157 909 ntBASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 COX11P1-201ENST00000489116 835 ntBASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF6Q9Y4K3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF6Q9Y4K3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms