Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 UNC93B6-202ENST00000528242 690 ntBASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 AC040169.1-201ENST00000565382 521 ntBASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.88■□□□□ 0.61
SSX2IPQ9Y2D8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 COX5BP2-201ENST00000392354 334 ntBASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 DNAJB3-201ENST00000446806 729 ntBASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 AC005332.8-201ENST00000622750 2735 ntBASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 AC005593.1-201ENST00000624894 515 ntBASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SSX2IPQ9Y2D8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 AC005104.2-201ENST00000427818 678 ntBASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 BX005266.1-201ENST00000473402 457 ntBASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 MIR3687-2-201ENST00000577708 61 ntBASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 MIR3687-1-201ENST00000614492 61 ntBASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 AL031598.1-201ENST00000561511 1773 ntBASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX2IPQ9Y2D8 AC010460.3-201ENST00000511359 1579 ntBASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.85■□□□□ 0.61
SSX2IPQ9Y2D8 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms