Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 SLC25A6P5-201ENST00000435663 894 ntBASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 AC112698.1-201ENST00000510299 916 ntBASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 AP000997.3-201ENST00000623333 2250 ntBASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA1Q9UND3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 PMS2P1-201ENST00000431037 1228 ntBASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 AC018712.1-201ENST00000455767 687 ntBASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 AL049840.3-201ENST00000602669 611 ntBASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 AL671883.3-201ENST00000603274 991 ntBASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA1Q9UND3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
NPIPA1Q9UND3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPA1Q9UND3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
NPIPA1Q9UND3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 AP005117.1-201ENST00000584346 1413 ntBASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 RPS2P28-201ENST00000314255 741 ntBASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 MIR574-201ENST00000385209 96 ntBASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 AC243591.1-201ENST00000452967 1364 ntBASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA1Q9UND3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPA1Q9UND3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms