Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 AC079776.2-201ENST00000641154 1609 ntBASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 AL355877.3-201ENST00000622820 899 ntBASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 AC073592.4-201ENST00000623827 446 ntBASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 AC141586.5-201ENST00000624546 2050 ntBASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHA4Q9UN74 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 AC148477.5-201ENST00000625164 1645 ntBASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 CROCCP2-202ENST00000412962 2773 ntBASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 AL450487.1-201ENST00000426799 995 ntBASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 SAPCD2P3-201ENST00000455031 850 ntBASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 AF238378.1-201ENST00000526806 358 ntBASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 MTDHP3-201ENST00000594186 672 ntBASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHA4Q9UN74 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHA4Q9UN74 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHA4Q9UN74 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHA4Q9UN74 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.02■□□□□ 0.79
PCDHA4Q9UN74 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 AL020989.1-201ENST00000422979 469 ntBASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 KRT126P-201ENST00000549467 1181 ntBASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 AC008608.2-201ENST00000606089 416 ntBASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 AC026471.1-201ENST00000564629 3026 ntBASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 LETM1P2-201ENST00000597330 2178 ntBASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 AC139713.2-201ENST00000641328 2723 ntBASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHA4Q9UN74 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 FGFR3P6-201ENST00000457012 610 ntBASIC20■□□□□ 0.79
PCDHA4Q9UN74 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms