Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 AC008764.6-201ENST00000595909 2069 ntBASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 MIR3687-2-201ENST00000577708 61 ntBASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 MIR3687-1-201ENST00000614492 61 ntBASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.08■□□□□ 0.81
SYNPO2Q9UMS6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.08■□□□□ 0.8
SYNPO2Q9UMS6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 AC010507.1-201ENST00000633895 436 ntBASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPO2Q9UMS6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 NOC2LP1-202ENST00000452600 2235 ntBASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 AL355312.1-201ENST00000407115 2176 ntBASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 AC012317.2-201ENST00000623305 2251 ntBASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPO2Q9UMS6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 AC023274.1-201ENST00000418278 595 ntBASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 YBX1P5-201ENST00000509441 847 ntBASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 PDPK2P-202ENST00000562415 1191 ntBASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms