Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VTI1BQ9UEU0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.28■□□□□ 0.36
VTI1BQ9UEU0 AC106886.4-201ENST00000623557 2502 ntBASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 MIR1224-201ENST00000408193 85 ntBASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 AL157888.1-201ENST00000631930 593 ntBASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
VTI1BQ9UEU0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VTI1BQ9UEU0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VTI1BQ9UEU0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.27■□□□□ 0.35
VTI1BQ9UEU0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.27■□□□□ 0.35
VTI1BQ9UEU0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.27■□□□□ 0.35
VTI1BQ9UEU0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VTI1BQ9UEU0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 SPDYE15P-201ENST00000424157 909 ntBASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 KRT18P38-201ENST00000449496 1282 ntBASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 AL359075.1-203ENST00000462729 1002 ntBASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 AC010331.1-201ENST00000611423 582 ntBASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTI1BQ9UEU0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms