Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 POM121L3P-201ENST00000419331 1163 ntBASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 EMBP1-201ENST00000458200 901 ntBASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CUEDC1Q9NWM3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AC122714.2-201ENST00000502787 707 ntBASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AC091304.2-201ENST00000564639 760 ntBASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AL732292.2-201ENST00000609649 430 ntBASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AC019129.2-201ENST00000609837 1235 ntBASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AC139530.3-201ENST00000620344 690 ntBASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CUEDC1Q9NWM3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 MIR5100-201ENST00000579544 119 ntBASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 AC133963.1-201ENST00000504166 1679 ntBASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CUEDC1Q9NWM3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 HLA-J-201ENST00000462773 1622 ntBASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CUEDC1Q9NWM3 AC005104.2-201ENST00000427818 678 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms