Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 AC125634.1-201ENST00000438758 1403 ntBASIC16.32■□□□□ 0.2
POLE3Q9NRF9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 AL121672.3-201ENST00000608644 468 ntBASIC16.32■□□□□ 0.2
POLE3Q9NRF9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 AL590326.2-201ENST00000625139 305 ntBASIC16.32■□□□□ 0.2
POLE3Q9NRF9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.32■□□□□ 0.2
POLE3Q9NRF9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 BX276092.5-203ENST00000456199 560 ntBASIC16.31■□□□□ 0.2
POLE3Q9NRF9 VENTXP7-201ENST00000475503 772 ntBASIC16.31■□□□□ 0.2
POLE3Q9NRF9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 AC122714.2-201ENST00000502787 707 ntBASIC16.31■□□□□ 0.2
POLE3Q9NRF9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLE3Q9NRF9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 AL645608.8-201ENST00000606034 2086 ntBASIC16.3■□□□□ 0.2
POLE3Q9NRF9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 AC005332.1-201ENST00000577698 1310 ntBASIC16.3■□□□□ 0.2
POLE3Q9NRF9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 CHCHD2P8-201ENST00000429873 447 ntBASIC16.3■□□□□ 0.2
POLE3Q9NRF9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 FAM86EP-206ENST00000510506 987 ntBASIC16.3■□□□□ 0.2
POLE3Q9NRF9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 NTF6B-201ENST00000591913 560 ntBASIC16.3■□□□□ 0.2
POLE3Q9NRF9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.3■□□□□ 0.2
POLE3Q9NRF9 AL138831.2-201ENST00000606564 490 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms