Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 RNF126P1-202ENST00000569893 925 ntBASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 AL139327.4-201ENST00000612362 153 ntBASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRTM1Q9HBL6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LRTM1Q9HBL6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LRTM1Q9HBL6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LRTM1Q9HBL6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 AC099398.1-201ENST00000567919 2776 ntBASIC16.89■□□□□ 0.29
LRTM1Q9HBL6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 AC002558.1-201ENST00000488906 803 ntBASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 KRT18P21-201ENST00000515767 1272 ntBASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 AC097374.2-201ENST00000618617 1306 ntBASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.88■□□□□ 0.29
LRTM1Q9HBL6 NKILA-202ENST00000614771 2598 ntBASIC16.87■□□□□ 0.29
LRTM1Q9HBL6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms