Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 AC004263.2-201ENST00000617183 678 ntBASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLK4Q9HAZ1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 PHGDH-209ENST00000641074 1780 ntBASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 TSPY12P-201ENST00000421279 868 ntBASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 CHCHD2P8-201ENST00000429873 447 ntBASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLK4Q9HAZ1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 AC069148.1-201ENST00000608741 768 ntBASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 AC022898.2-201ENST00000616822 1312 ntBASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 AC016734.2-201ENST00000624325 1377 ntBASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 LINC00167-201ENST00000530583 1419 ntBASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLK4Q9HAZ1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms