Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 LINC00304-203ENST00000565008 1864 ntBASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 AC136632.2-201ENST00000512891 861 ntBASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 RNA5SP415-201ENST00000517246 115 ntBASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 AC097637.2-201ENST00000624096 1997 ntBASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 AC104109.2-201ENST00000602919 1418 ntBASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 RNF165-205ENST00000588679 2904 ntBASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.84■□□□□ 0.93
CRNKL1Q9BZJ0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 AL139424.1-201ENST00000607572 797 ntBASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 AL139327.4-201ENST00000612362 153 ntBASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 PGM5P2-202ENST00000637225 1043 ntBASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CRNKL1Q9BZJ0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CRNKL1Q9BZJ0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.83■□□□□ 0.92
CRNKL1Q9BZJ0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CRNKL1Q9BZJ0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.83■□□□□ 0.92
CRNKL1Q9BZJ0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CRNKL1Q9BZJ0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CRNKL1Q9BZJ0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 ELK2BP-201ENST00000415014 1224 ntBASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 KRT18P58-201ENST00000527480 1120 ntBASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 AC005593.1-201ENST00000624894 515 ntBASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRNKL1Q9BZJ0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 AC006504.4-201ENST00000592118 1568 ntBASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 NOC2LP1-202ENST00000452600 2235 ntBASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 AC046185.3-201ENST00000623228 1824 ntBASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CRNKL1Q9BZJ0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms