Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL596325.1-201ENST00000563991 1082 ntBASIC23.08■■□□□ 1.29
ABCA3Q99758 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC23.08■■□□□ 1.29
ABCA3Q99758 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.08■■□□□ 1.29
ABCA3Q99758 CROCCP3-202ENST00000420820 1947 ntBASIC23.08■■□□□ 1.29
ABCA3Q99758 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.08■■□□□ 1.29
ABCA3Q99758 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCA3Q99758 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCA3Q99758 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCA3Q99758 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCA3Q99758 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.08■■□□□ 1.28
ABCA3Q99758 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCA3Q99758 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCA3Q99758 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC23.08■■□□□ 1.28
ABCA3Q99758 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCA3Q99758 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC23.08■■□□□ 1.28
ABCA3Q99758 SATB1-217ENST00000493952 626 ntTSL 3 BASIC23.08■■□□□ 1.28
ABCA3Q99758 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ABCA3Q99758 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC23.08■■□□□ 1.28
ABCA3Q99758 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC23.08■■□□□ 1.28
ABCA3Q99758 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC23.08■■□□□ 1.28
ABCA3Q99758 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
ABCA3Q99758 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
ABCA3Q99758 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
ABCA3Q99758 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 REXO1L11P-201ENST00000620964 1927 ntBASIC23.07■■□□□ 1.28
ABCA3Q99758 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.07■■□□□ 1.28
ABCA3Q99758 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCA3Q99758 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCA3Q99758 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCA3Q99758 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCA3Q99758 U91328.1-201ENST00000437528 223 ntBASIC23.07■■□□□ 1.28
ABCA3Q99758 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC23.07■■□□□ 1.28
ABCA3Q99758 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCA3Q99758 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
ABCA3Q99758 MIR6752-201ENST00000618442 71 ntBASIC23.07■■□□□ 1.28
ABCA3Q99758 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
ABCA3Q99758 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
ABCA3Q99758 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
ABCA3Q99758 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 WASH6P-202ENST00000359512 1437 ntBASIC23.07■■□□□ 1.28
ABCA3Q99758 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCA3Q99758 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCA3Q99758 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCA3Q99758 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ABCA3Q99758 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCA3Q99758 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC23.06■■□□□ 1.28
ABCA3Q99758 COQ6-210ENST00000554920 649 ntTSL 3 BASIC23.06■■□□□ 1.28
ABCA3Q99758 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC23.06■■□□□ 1.28
ABCA3Q99758 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ABCA3Q99758 IGHV3-72-202ENST00000621503 303 ntBASIC23.06■■□□□ 1.28
ABCA3Q99758 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC23.06■■□□□ 1.28
ABCA3Q99758 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 HMGA1P7-201ENST00000406908 502 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
ABCA3Q99758 AC241585.1-201ENST00000433527 519 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 AP000842.3-202ENST00000569238 1080 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC23.05■■□□□ 1.28
ABCA3Q99758 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC23.05■■□□□ 1.28
ABCA3Q99758 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.05■■□□□ 1.28
ABCA3Q99758 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
ABCA3Q99758 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.05■■□□□ 1.28
ABCA3Q99758 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.05■■□□□ 1.28
ABCA3Q99758 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.05■■□□□ 1.28
ABCA3Q99758 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.05■■□□□ 1.28
ABCA3Q99758 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC23.05■■□□□ 1.28
ABCA3Q99758 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC23.05■■□□□ 1.28
ABCA3Q99758 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
ABCA3Q99758 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC23.05■■□□□ 1.28
ABCA3Q99758 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.05■■□□□ 1.28
ABCA3Q99758 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC23.05■■□□□ 1.28
ABCA3Q99758 KRT8P23-201ENST00000560090 1207 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 WASH4P-201ENST00000564273 1246 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 MIR3909-201ENST00000579518 119 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 MIR4515-201ENST00000584082 81 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 AC009118.2-201ENST00000613275 655 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms