Protein–RNA interactions for Protein: Q99675

CGRRF1, Cell growth regulator with RING finger domain protein 1, humanhuman

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1Q99675 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CGRRF1Q99675 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CGRRF1Q99675 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.89■□□□□ 0.62
CGRRF1Q99675 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CGRRF1Q99675 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CGRRF1Q99675 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CGRRF1Q99675 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CGRRF1Q99675 RN7SL510P-201ENST00000581311 263 ntBASIC18.89■□□□□ 0.61
CGRRF1Q99675 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.89■□□□□ 0.61
CGRRF1Q99675 AL691432.3-201ENST00000621860 400 ntBASIC18.89■□□□□ 0.61
CGRRF1Q99675 AL139288.1-201ENST00000623748 933 ntBASIC18.89■□□□□ 0.61
CGRRF1Q99675 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CGRRF1Q99675 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CGRRF1Q99675 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.89■□□□□ 0.61
CGRRF1Q99675 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGRRF1Q99675 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CGRRF1Q99675 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CGRRF1Q99675 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.88■□□□□ 0.61
CGRRF1Q99675 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CGRRF1Q99675 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CGRRF1Q99675 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.88■□□□□ 0.61
CGRRF1Q99675 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 AL356309.3-201ENST00000624132 1934 ntBASIC18.88■□□□□ 0.61
CGRRF1Q99675 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CGRRF1Q99675 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 AC004870.1-201ENST00000315132 882 ntBASIC18.87■□□□□ 0.61
CGRRF1Q99675 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 SIGLEC30P-201ENST00000455569 941 ntBASIC18.87■□□□□ 0.61
CGRRF1Q99675 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 AC138932.1-201ENST00000534164 6830 ntBASIC18.87■□□□□ 0.61
CGRRF1Q99675 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 NKAPP1-205ENST00000585790 367 ntBASIC18.87■□□□□ 0.61
CGRRF1Q99675 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CGRRF1Q99675 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.87■□□□□ 0.61
CGRRF1Q99675 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 PP12613-201ENST00000424958 2230 ntBASIC18.86■□□□□ 0.61
CGRRF1Q99675 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 BX005266.1-201ENST00000473402 457 ntBASIC18.86■□□□□ 0.61
CGRRF1Q99675 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.86■□□□□ 0.61
CGRRF1Q99675 SART3-203ENST00000546611 1184 ntBASIC18.86■□□□□ 0.61
CGRRF1Q99675 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CGRRF1Q99675 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms