Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 LINC00554-201ENST00000564841 3011 ntBASIC14.84□□□□□ -0.03
CLCC1Q96S66 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 MIR564-202ENST00000385049 94 ntBASIC14.84□□□□□ -0.03
CLCC1Q96S66 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 AC007663.1-201ENST00000438948 1240 ntBASIC14.84□□□□□ -0.03
CLCC1Q96S66 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 MIR3180-5-201ENST00000583743 153 ntBASIC14.84□□□□□ -0.03
CLCC1Q96S66 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 AL023803.3-201ENST00000615559 522 ntBASIC14.84□□□□□ -0.03
CLCC1Q96S66 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 GMCL1P1-201ENST00000463439 1581 ntBASIC14.84□□□□□ -0.03
CLCC1Q96S66 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCC1Q96S66 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCC1Q96S66 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLCC1Q96S66 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CLCC1Q96S66 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CLCC1Q96S66 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CLCC1Q96S66 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLCC1Q96S66 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLCC1Q96S66 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.83□□□□□ -0.03
CLCC1Q96S66 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLCC1Q96S66 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLCC1Q96S66 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 AC128688.1-201ENST00000487626 519 ntBASIC14.83□□□□□ -0.04
CLCC1Q96S66 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 AC010947.1-201ENST00000623454 693 ntBASIC14.83□□□□□ -0.04
CLCC1Q96S66 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 PCDHB19P-201ENST00000570871 2371 ntBASIC14.83□□□□□ -0.04
CLCC1Q96S66 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCC1Q96S66 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.83□□□□□ -0.04
CLCC1Q96S66 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 ECEL1P2-202ENST00000465689 757 ntBASIC14.82□□□□□ -0.04
CLCC1Q96S66 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLCC1Q96S66 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLCC1Q96S66 AC092338.2-201ENST00000568827 1415 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms