Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 AC092580.3-201ENST00000430932 139 ntBASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 AL805961.1-202ENST00000641562 540 ntBASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 AL355306.1-201ENST00000415580 579 ntBASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD1Q96PZ7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 RPS15P9-201ENST00000494093 319 ntBASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 CROCCP3-202ENST00000420820 1947 ntBASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 HCG4-201ENST00000418983 998 ntBASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD1Q96PZ7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 SPDYE14P-201ENST00000442619 822 ntBASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD1Q96PZ7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms