Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.62■□□□□ 0.25
COL21A1Q96P44 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL21A1Q96P44 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 GUSBP12-201ENST00000513727 720 ntBASIC16.61■□□□□ 0.25
COL21A1Q96P44 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 AC116407.2-201ENST00000613639 860 ntBASIC16.61■□□□□ 0.25
COL21A1Q96P44 AC009154.2-201ENST00000621177 724 ntBASIC16.61■□□□□ 0.25
COL21A1Q96P44 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 AC009949.1-201ENST00000623048 1830 ntBASIC16.61■□□□□ 0.25
COL21A1Q96P44 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.61■□□□□ 0.25
COL21A1Q96P44 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL21A1Q96P44 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 AC090616.6-201ENST00000582640 721 ntBASIC16.6■□□□□ 0.25
COL21A1Q96P44 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL21A1Q96P44 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL21A1Q96P44 AC022211.2-201ENST00000585075 2527 ntBASIC16.6■□□□□ 0.25
COL21A1Q96P44 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms