Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 MYCLP1-201ENST00000372451 1075 ntBASIC18.09■□□□□ 0.49
RPRD1AQ96P16 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 KLF4P1-201ENST00000412782 1185 ntBASIC18.09■□□□□ 0.49
RPRD1AQ96P16 AC026396.1-201ENST00000419388 421 ntBASIC18.09■□□□□ 0.49
RPRD1AQ96P16 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 TP73-AS1-207ENST00000624167 988 ntBASIC18.09■□□□□ 0.49
RPRD1AQ96P16 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 LINC00304-203ENST00000565008 1864 ntBASIC18.09■□□□□ 0.49
RPRD1AQ96P16 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPRD1AQ96P16 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPRD1AQ96P16 GNAS-203ENST00000306120 1878 ntBASIC18.08■□□□□ 0.49
RPRD1AQ96P16 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 AC003669.1-201ENST00000334569 611 ntBASIC18.08■□□□□ 0.48
RPRD1AQ96P16 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 FAM197Y8-203ENST00000450145 560 ntBASIC18.08■□□□□ 0.48
RPRD1AQ96P16 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 AP002469.2-201ENST00000531724 424 ntBASIC18.08■□□□□ 0.48
RPRD1AQ96P16 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 AL139288.1-201ENST00000623748 933 ntBASIC18.08■□□□□ 0.48
RPRD1AQ96P16 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 AC079776.2-201ENST00000641154 1609 ntBASIC18.08■□□□□ 0.48
RPRD1AQ96P16 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RPRD1AQ96P16 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 AC068880.1-201ENST00000507289 2297 ntBASIC18.07■□□□□ 0.48
RPRD1AQ96P16 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 SPDYE21P-201ENST00000413323 827 ntBASIC18.07■□□□□ 0.48
RPRD1AQ96P16 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 SART3-203ENST00000546611 1184 ntBASIC18.07■□□□□ 0.48
RPRD1AQ96P16 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 STK25P1-201ENST00000585406 838 ntBASIC18.07■□□□□ 0.48
RPRD1AQ96P16 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.07■□□□□ 0.48
RPRD1AQ96P16 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms