Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 UNC93B6-202ENST00000528242 690 ntBASIC14.28□□□□□ -0.12
ZNF48Q96MX3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 BCL2-203ENST00000589955 5011 ntBASIC14.28□□□□□ -0.12
ZNF48Q96MX3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 AC004817.3-201ENST00000602957 2129 ntBASIC14.28□□□□□ -0.12
ZNF48Q96MX3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 FAM197Y3-203ENST00000618346 717 ntBASIC14.28□□□□□ -0.12
ZNF48Q96MX3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF48Q96MX3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF48Q96MX3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 LAGE3P1-201ENST00000425356 484 ntBASIC14.27□□□□□ -0.13
ZNF48Q96MX3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 AD001527.2-201ENST00000622994 785 ntBASIC14.27□□□□□ -0.13
ZNF48Q96MX3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF48Q96MX3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 AC068880.1-201ENST00000507289 2297 ntBASIC14.26□□□□□ -0.13
ZNF48Q96MX3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 AL096828.2-201ENST00000567259 1965 ntBASIC14.26□□□□□ -0.13
ZNF48Q96MX3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 KRT18P3-201ENST00000451602 1288 ntBASIC14.26□□□□□ -0.13
ZNF48Q96MX3 AC122714.2-201ENST00000502787 707 ntBASIC14.26□□□□□ -0.13
ZNF48Q96MX3 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms