Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 KLF4P1-201ENST00000412782 1185 ntBASIC22.77■■□□□ 1.24
CFAP44Q96MT7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 HNRNPDP1-201ENST00000439535 754 ntBASIC22.77■■□□□ 1.24
CFAP44Q96MT7 BX005266.1-201ENST00000473402 457 ntBASIC22.77■■□□□ 1.24
CFAP44Q96MT7 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 AC012183.1-201ENST00000625197 499 ntBASIC22.77■■□□□ 1.24
CFAP44Q96MT7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP44Q96MT7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
CFAP44Q96MT7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 AC009336.1-201ENST00000608941 1553 ntBASIC22.76■■□□□ 1.23
CFAP44Q96MT7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 AF186996.4-201ENST00000467186 377 ntBASIC22.76■■□□□ 1.23
CFAP44Q96MT7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 AC064862.7-201ENST00000604520 867 ntBASIC22.76■■□□□ 1.23
CFAP44Q96MT7 AL022326.1-202ENST00000641533 845 ntBASIC22.76■■□□□ 1.23
CFAP44Q96MT7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 AC133963.1-201ENST00000504166 1679 ntBASIC22.76■■□□□ 1.23
CFAP44Q96MT7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 HLA-A-201ENST00000376802 1334 ntBASIC22.76■■□□□ 1.23
CFAP44Q96MT7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.76■■□□□ 1.23
CFAP44Q96MT7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 AC073648.2-201ENST00000510116 352 ntBASIC22.75■■□□□ 1.23
CFAP44Q96MT7 STK19B-204ENST00000512515 211 ntBASIC22.75■■□□□ 1.23
CFAP44Q96MT7 MTDHP4-201ENST00000600287 670 ntBASIC22.75■■□□□ 1.23
CFAP44Q96MT7 AL773604.1-201ENST00000617417 272 ntBASIC22.75■■□□□ 1.23
CFAP44Q96MT7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
CFAP44Q96MT7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 AC018470.1-201ENST00000624790 3129 ntBASIC22.74■■□□□ 1.23
CFAP44Q96MT7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP44Q96MT7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms