Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 FAM207CP-201ENST00000443486 507 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC074386.1-202ENST00000463561 864 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 INGX-202ENST00000489074 768 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC008761.3-201ENST00000624803 892 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC006116.8-202ENST00000587620 1550 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC097637.2-201ENST00000624096 1997 ntBASIC14.82□□□□□ -0.04
SPG11Q96JI7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.82□□□□□ -0.04
SPG11Q96JI7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 AL512356.2-201ENST00000546955 174 ntBASIC14.81□□□□□ -0.04
SPG11Q96JI7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 GGTLC5P-201ENST00000617623 998 ntBASIC14.81□□□□□ -0.04
SPG11Q96JI7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.81□□□□□ -0.04
SPG11Q96JI7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPG11Q96JI7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 AL353593.2-201ENST00000602529 1483 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 OR8S1-201ENST00000310194 1080 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 AL592309.1-201ENST00000443127 649 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 CR383656.12-201ENST00000549567 513 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 ANO7L1-203ENST00000602586 1720 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 AP005018.1-201ENST00000525475 301 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.8□□□□□ -0.04
SPG11Q96JI7 AC099522.2-201ENST00000607001 744 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 AC009093.7-201ENST00000623853 1223 ntBASIC14.8□□□□□ -0.04
SPG11Q96JI7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPG11Q96JI7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms