Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
PDLIM5Q96HC4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 KRT18P35-201ENST00000510488 1269 ntBASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 AC091076.1-201ENST00000610741 619 ntBASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 NPAP1P7-201ENST00000613027 823 ntBASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 AL358472.4-201ENST00000633140 710 ntBASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM5Q96HC4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 POM121L3P-201ENST00000419331 1163 ntBASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 BNIP3P18-201ENST00000593976 575 ntBASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 AC080080.1-201ENST00000625121 2420 ntBASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.12■□□□□ 0.33
PDLIM5Q96HC4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 AC009336.1-201ENST00000608941 1553 ntBASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 AC093525.9-201ENST00000624961 1746 ntBASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 MINOS1P3-201ENST00000457048 203 ntBASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 AC069148.1-201ENST00000608741 768 ntBASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms