Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.86■□□□□ 0.13
LRRC46Q96FV0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRC46Q96FV0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.85■□□□□ 0.13
LRRC46Q96FV0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 KRT18P65-201ENST00000439811 1286 ntBASIC15.85■□□□□ 0.13
LRRC46Q96FV0 MTCL1P1-201ENST00000446207 792 ntBASIC15.85■□□□□ 0.13
LRRC46Q96FV0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 RNPS1P1-201ENST00000507437 918 ntBASIC15.85■□□□□ 0.13
LRRC46Q96FV0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 AL355877.3-201ENST00000622820 899 ntBASIC15.85■□□□□ 0.13
LRRC46Q96FV0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 WIZP1-201ENST00000531444 2299 ntBASIC15.85■□□□□ 0.13
LRRC46Q96FV0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 IL9RP2-201ENST00000423948 1312 ntBASIC15.85■□□□□ 0.13
LRRC46Q96FV0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRC46Q96FV0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 KRT18P58-201ENST00000527480 1120 ntBASIC15.84■□□□□ 0.13
LRRC46Q96FV0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 MTDHP3-201ENST00000594186 672 ntBASIC15.84■□□□□ 0.13
LRRC46Q96FV0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRC46Q96FV0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms