Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.56■□□□□ 0.4
SIPA1Q96FS4 AC002558.1-201ENST00000488906 803 ntBASIC17.56■□□□□ 0.4
SIPA1Q96FS4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 AP001160.2-201ENST00000596071 487 ntBASIC17.56■□□□□ 0.4
SIPA1Q96FS4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 AC009336.1-201ENST00000608941 1553 ntBASIC17.56■□□□□ 0.4
SIPA1Q96FS4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIPA1Q96FS4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 MYCLP1-201ENST00000372451 1075 ntBASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 PRSS29P-201ENST00000440800 595 ntBASIC17.55■□□□□ 0.4
SIPA1Q96FS4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 AC004790.2-201ENST00000623588 572 ntBASIC17.55■□□□□ 0.4
SIPA1Q96FS4 AC134684.3-201ENST00000641758 218 ntBASIC17.55■□□□□ 0.4
SIPA1Q96FS4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TNXA-203ENST00000507684 2038 ntBASIC17.55■□□□□ 0.4
SIPA1Q96FS4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SIPA1Q96FS4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 AC002310.6-201ENST00000624451 1377 ntBASIC17.54■□□□□ 0.4
SIPA1Q96FS4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIPA1Q96FS4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms