Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 AC018712.1-201ENST00000455767 687 ntBASIC22.53■■□□□ 1.2
ZNF428Q96B54 AF186996.4-201ENST00000467186 377 ntBASIC22.53■■□□□ 1.2
ZNF428Q96B54 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 AC012640.2-201ENST00000561606 901 ntBASIC22.53■■□□□ 1.2
ZNF428Q96B54 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 BX640515.1-201ENST00000617215 977 ntBASIC22.53■■□□□ 1.2
ZNF428Q96B54 AC073592.4-201ENST00000623827 446 ntBASIC22.53■■□□□ 1.2
ZNF428Q96B54 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ZNF428Q96B54 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF428Q96B54 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.52■■□□□ 1.2
ZNF428Q96B54 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 AP005117.1-201ENST00000584346 1413 ntBASIC22.52■■□□□ 1.2
ZNF428Q96B54 SIGLEC16-201ENST00000599858 1437 ntBASIC22.52■■□□□ 1.2
ZNF428Q96B54 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 POLD2P1-201ENST00000511220 997 ntBASIC22.52■■□□□ 1.2
ZNF428Q96B54 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.52■■□□□ 1.2
ZNF428Q96B54 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ZNF428Q96B54 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22.52■■□□□ 1.19
ZNF428Q96B54 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
ZNF428Q96B54 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.51■■□□□ 1.19
ZNF428Q96B54 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 FAM215A-202ENST00000632077 792 ntBASIC22.51■■□□□ 1.19
ZNF428Q96B54 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.51■■□□□ 1.19
ZNF428Q96B54 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF428Q96B54 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 AC009336.1-201ENST00000608941 1553 ntBASIC22.5■■□□□ 1.19
ZNF428Q96B54 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 MIR574-201ENST00000385209 96 ntBASIC22.5■■□□□ 1.19
ZNF428Q96B54 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 AC023511.2-201ENST00000618803 211 ntBASIC22.5■■□□□ 1.19
ZNF428Q96B54 AC116407.3-201ENST00000623905 1129 ntBASIC22.5■■□□□ 1.19
ZNF428Q96B54 AC073592.5-201ENST00000624854 528 ntBASIC22.5■■□□□ 1.19
ZNF428Q96B54 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
ZNF428Q96B54 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF428Q96B54 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms