Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 KRT18P5-201ENST00000436075 1291 ntBASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 CKBP1-201ENST00000565489 1086 ntBASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 AC008622.2-201ENST00000617006 1229 ntBASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SMIM11BQ8TCY0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 PAUPAR-201ENST00000630360 2965 ntBASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AC116407.2-201ENST00000613639 860 ntBASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AL445675.2-201ENST00000620291 557 ntBASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AC092171.3-201ENST00000610122 2651 ntBASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AC092850.2-201ENST00000623821 2697 ntBASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AL662844.4-201ENST00000606367 2838 ntBASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMIM11BQ8TCY0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SMIM11BQ8TCY0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms