Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLHC1Q8NHS4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 AC011676.5-201ENST00000624864 2660 ntBASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 LYSMD4-203ENST00000378904 2122 ntBASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 MTCL1P1-201ENST00000446207 792 ntBASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 AC005332.3-201ENST00000589904 676 ntBASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 NKILA-202ENST00000614771 2598 ntBASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLHC1Q8NHS4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 BX276092.7-203ENST00000637198 1536 ntBASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 AC092647.4-201ENST00000457211 535 ntBASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 AC068472.1-201ENST00000474589 881 ntBASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 RNF126P1-202ENST00000569893 925 ntBASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 HYMAI.1-201ENST00000620949 238 ntBASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 LINC01311-201ENST00000565162 1445 ntBASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLHC1Q8NHS4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 Z83836.1-201ENST00000624605 1642 ntBASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLHC1Q8NHS4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms