Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRFBP1Q8NEF9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.77■□□□□ 0.27
SRFBP1Q8NEF9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 AC096582.2-201ENST00000510860 516 ntBASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRFBP1Q8NEF9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 BNIP3P18-201ENST00000593976 575 ntBASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 AC114341.1-201ENST00000618070 349 ntBASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.75■□□□□ 0.27
SRFBP1Q8NEF9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.74■□□□□ 0.27
SRFBP1Q8NEF9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SRFBP1Q8NEF9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRFBP1Q8NEF9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.74■□□□□ 0.27
SRFBP1Q8NEF9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms