Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00304Q8N9R0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AC103564.2-201ENST00000432853 1299 ntBASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AC122714.2-201ENST00000502787 707 ntBASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 RN7SL510P-201ENST00000581311 263 ntBASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AC100803.2-201ENST00000562459 1963 ntBASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 AL354751.1-201ENST00000412768 1863 ntBASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 INTS4P1-201ENST00000438455 1935 ntBASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
LINC00304Q8N9R0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 AC009949.1-201ENST00000623048 1830 ntBASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00304Q8N9R0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms