Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAM1L1Q8N609 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAM1L1Q8N609 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 FAM197Y8-203ENST00000450145 560 ntBASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 AP002469.2-201ENST00000531724 424 ntBASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAM1L1Q8N609 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AL138688.1-201ENST00000624851 1594 ntBASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AC073648.2-201ENST00000510116 352 ntBASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AC021087.4-201ENST00000563761 564 ntBASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAM1L1Q8N609 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 AC064862.7-201ENST00000604520 867 ntBASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAM1L1Q8N609 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms