Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VPS8Q8N3P4 FST-202ENST00000396947 2538 ntTSL 5 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 ZNF259P1-201ENST00000407656 1365 ntBASIC27.23■■□□□ 1.95
VPS8Q8N3P4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 MED15P5-201ENST00000423150 992 ntBASIC27.23■■□□□ 1.95
VPS8Q8N3P4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 FAM197Y3-203ENST00000618346 717 ntBASIC27.23■■□□□ 1.95
VPS8Q8N3P4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
VPS8Q8N3P4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 EGFEM1P-202ENST00000431685 1563 ntBASIC27.22■■□□□ 1.95
VPS8Q8N3P4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 AC010654.1-201ENST00000615722 808 ntBASIC27.22■■□□□ 1.95
VPS8Q8N3P4 AC023511.2-201ENST00000618803 211 ntBASIC27.22■■□□□ 1.95
VPS8Q8N3P4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 HNRNPRP1-201ENST00000453465 1695 ntBASIC27.22■■□□□ 1.95
VPS8Q8N3P4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC27.22■■□□□ 1.95
VPS8Q8N3P4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 AC007967.2-201ENST00000432613 625 ntBASIC27.21■■□□□ 1.95
VPS8Q8N3P4 AL591424.1-201ENST00000442569 1213 ntBASIC27.21■■□□□ 1.95
VPS8Q8N3P4 HS6ST1P1-201ENST00000481504 1234 ntBASIC27.21■■□□□ 1.95
VPS8Q8N3P4 POLD2P1-201ENST00000511220 997 ntBASIC27.21■■□□□ 1.95
VPS8Q8N3P4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
VPS8Q8N3P4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 PP12613-201ENST00000424958 2230 ntBASIC27.2■■□□□ 1.95
VPS8Q8N3P4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
VPS8Q8N3P4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 AC087163.2-201ENST00000457299 853 ntBASIC27.2■■□□□ 1.94
VPS8Q8N3P4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC27.2■■□□□ 1.94
VPS8Q8N3P4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
VPS8Q8N3P4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
VPS8Q8N3P4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
VPS8Q8N3P4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC27.19■■□□□ 1.94
VPS8Q8N3P4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC27.19■■□□□ 1.94
VPS8Q8N3P4 AC064836.3-201ENST00000607928 673 ntBASIC27.19■■□□□ 1.94
VPS8Q8N3P4 AC027601.4-201ENST00000611259 610 ntBASIC27.19■■□□□ 1.94
VPS8Q8N3P4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
VPS8Q8N3P4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms