Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 AC004461.1-201ENST00000412461 403 ntBASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 AC023141.5-201ENST00000458585 616 ntBASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
ARHGEF28Q8N1W1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 AC129492.6-201ENST00000611383 1305 ntBASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 AL355312.1-201ENST00000407115 2176 ntBASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 AC074386.1-202ENST00000463561 864 ntBASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 REXO1L3P-201ENST00000622202 1288 ntBASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF28Q8N1W1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 AC135050.7-201ENST00000624508 2218 ntBASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 AL355306.1-201ENST00000415580 579 ntBASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 ACTG1P14-201ENST00000446382 1122 ntBASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF28Q8N1W1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 AP002472.1-201ENST00000577490 586 ntBASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 AC093028.1-201ENST00000622998 982 ntBASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 AC012317.2-201ENST00000623305 2251 ntBASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 KRT18P28-201ENST00000453838 1332 ntBASIC24.03■■□□□ 1.44
ARHGEF28Q8N1W1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ARHGEF28Q8N1W1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC24.02■■□□□ 1.44
ARHGEF28Q8N1W1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
ARHGEF28Q8N1W1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms