Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 MYCLP1-201ENST00000372451 1075 ntBASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 IGHV3-52-201ENST00000519770 353 ntBASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 AC060834.1-201ENST00000443027 2032 ntBASIC21.67■■□□□ 1.06
CHD1LQ86WJ1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 KRT8P10-201ENST00000450021 1447 ntBASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 FAM220CP-201ENST00000395253 831 ntBASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 NKILA-202ENST00000614771 2598 ntBASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 AC046185.3-201ENST00000623228 1824 ntBASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHD1LQ86WJ1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 AC103564.2-201ENST00000432853 1299 ntBASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.65■■□□□ 1.06
CHD1LQ86WJ1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CHD1LQ86WJ1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHD1LQ86WJ1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.64■■□□□ 1.06
CHD1LQ86WJ1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CHD1LQ86WJ1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHD1LQ86WJ1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CHD1LQ86WJ1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 AC011676.5-201ENST00000624864 2660 ntBASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD1LQ86WJ1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms